Amplicon sequencing from Australian Aquatic environments
[This dataset was processed using the GBIF Metabarcoding Data Toolkit.]
","language":"eng","homepage":"https://www.australianmicrobiome.com/","citation":{"text":"Australian Microbiome: Australian Microbiome 18S (Eukaryote) Dataset of Aquatic Samples https://doi.org/10.15468/3s7eec accessed via GBIF.org on 2026-01-14. accessed via GBIF.org on 2026-10-14.","citationProvidedBySource":true},"contactsCitation":[],"lockedForAutoUpdate":false,"createdBy":"f188404c-d039-47c2-a74d-9601497a02a8","modifiedBy":"jwaller","created":"2025-12-23T16:22:32.090+00:00","modified":"2026-01-14T09:12:36.109+00:00","contacts":[{"key":6848397,"type":"ORIGINATOR","primary":true,"userId":[],"lastName":"Australian Microbiome","position":[],"email":[],"phone":[],"homepage":[],"address":[],"country":"AU","createdBy":"crawler.gbif.org","modifiedBy":"crawler.gbif.org","created":"2026-01-12T22:02:47.370+00:00","modified":"2026-01-12T22:02:47.370+00:00"},{"key":6848398,"type":"ADMINISTRATIVE_POINT_OF_CONTACT","primary":true,"userId":[],"firstName":"Andrew","lastName":"Bissett","position":[],"email":["andrew.bissett@csiro.au"],"phone":[],"homepage":[],"organization":"CSIRO","address":[],"city":"Hobart","country":"AU","createdBy":"crawler.gbif.org","modifiedBy":"crawler.gbif.org","created":"2026-01-12T22:02:47.373+00:00","modified":"2026-01-12T22:02:47.373+00:00"}],"endpoints":[{"key":1179354,"type":"DWC_ARCHIVE","url":"https://www.marine.csiro.au/ipt/archive.do?r=am_18sv4_aquatic","createdBy":"f188404c-d039-47c2-a74d-9601497a02a8","modifiedBy":"f188404c-d039-47c2-a74d-9601497a02a8","created":"2025-12-23T16:22:32.262+00:00","modified":"2025-12-23T16:22:32.262+00:00","machineTags":[]},{"key":1179353,"type":"EML","url":"https://www.marine.csiro.au/ipt/eml.do?r=am_18sv4_aquatic","createdBy":"f188404c-d039-47c2-a74d-9601497a02a8","modifiedBy":"f188404c-d039-47c2-a74d-9601497a02a8","created":"2025-12-23T16:22:32.228+00:00","modified":"2025-12-23T16:22:32.228+00:00","machineTags":[]}],"machineTags":[{"key":33143070,"namespace":"crawler.gbif.org","name":"crawl_attempt","value":"38","createdBy":"crawler.gbif.org","created":"2026-10-12T02:32:43.033+00:00"}],"tags":[],"identifiers":[{"key":461855,"type":"URL","identifier":"https://www.marine.csiro.au/ipt/resource?r=am_18sv4_aquatic","createdBy":"crawler.gbif.org","created":"2026-01-12T22:02:47.375+00:00","primary":false}],"comments":[{"key":46168,"content":"https://github.com/gbif/dataset-category-management/issues/8131","createdBy":"jwaller","modifiedBy":"jwaller","created":"2026-01-14T09:12:36.500+00:00","modified":"2026-01-14T09:12:36.500+00:00"},{"key":46122,"content":"The publisher has written to helpdesk about the failed ingestions. I have triggered a crawl, but notice it is VERY slow to pull the archive. The previous file shows as only 1GB on the filesystem but the IPT reports it to be 5GB. After the crawl, it is unapcked with only an occurrence and EMOF file, so the metadata update correctly fails. No meta.xml exists.","createdBy":"trobertson","modifiedBy":"trobertson","created":"2025-12-29T18:17:32.315+00:00","modified":"2025-12-29T18:17:32.315+00:00"}],"bibliographicCitations":[{"text":"Bissett, A., A. Fitzgerald, T. Meintjes, P.M. Mele, F. Reith, P.G. Dennis, M.F. Breed, B. Brown, M.V. Brown, J. Brugger, M. Byrne, S. Caddy-Retalic, B. Carmody, D.J. Coates, C. Correa, B.C. Ferrari, V. Gupta, K. Hamonts, A. Haslem, P. Hugenholtz, M. Karan, J. Koval, A.J. Lowe, S. Macdonald, L. McGrath, D. Martin, M. Morgan, K.I. North, C. Paungfoo-Lonhienne, E. Pendall, L. Phillips, R. Pirzl, J.R. Powell, M.A. Ragan, S. Schmidt, N. Seymour, I. Snape, J.R. Stephen, M. Stevens, M. Tinning, K. Williams, Y.K. Yeoh, C.M. Zammit, and A. Young (2016) Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database. Gigascience, 5.","identifier":"DOI:10.1186/s13742-016-0126-5","citationProvidedBySource":false},{"text":"Brown, M. V., Van De Kamp, J., Ostrowski, M., Seymour, J. R., Ingleton, T., Messer, L. F., & Nelson, T. M. et al. (2018). Systematic, continental scale temporal monitoring of marine pelagic microbiota by the Australian Marine Microbial Biodiversity Initiative. Scientific data, 5: 180130.","identifier":"DOI:10.1038/sdata.2018.130","citationProvidedBySource":false}],"curatorialUnits":[],"taxonomicCoverages":[],"geographicCoverages":[],"temporalCoverages":[],"keywordCollections":[{"thesaurus":"N/A","keywords":["metabarcoding","DNA","MDT"]},{"thesaurus":"GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type_2015-07-10.xml","keywords":["Occurrence"]}],"countryCoverage":[],"collections":[],"dataDescriptions":[],"dataLanguage":"eng","pubDate":"2025-12-23T00:00:00.000+00:00","maintenanceUpdateFrequency":"DAILY","maintenanceDescription":"","license":"http://creativecommons.org/publicdomain/zero/1.0/legalcode","dwca":{"coreType":"http://rs.tdwg.org/dwc/terms/Occurrence","extensions":["http://rs.gbif.org/terms/1.0/DNADerivedData","http://rs.iobis.org/obis/terms/ExtendedMeasurementOrFact"],"modified":"2026-02-04T15:32:38.603+00:00"},"category":["eDNA"],"approximateCounts":{"occurrenceCount":10868179}}